tools¶
The collection of tools provided with openNCEM. These are based on the algorithms and routines contained in ncempy and are meant to provide solutions to specific problems. They are subordered by the experiment/simulation/task they address.
The GUI tools come with additional requirements:
PySide (for GUI)
pyqtgraph (for plotting in GUI)
RingDiff¶
Tool to evaluate ring diffraction patterns. The command line tool is split into two parts: cmdline_ringdiff_prepare creates an evaluation file, and cmdline_ringdiff_run executes the evaluation. This allows settings to be modified with an external HDF5 tool (such as the HDF Viewer) before running the evaluation.
The GUI tool allows a standalone evaluation of ring diffraction patterns. It can read EMD files containing a single or a series of diffraction patterns, or read the settings and linked data from an evaluation file.
ser2emd¶
A converter to read SER files and save them as EMD files. Optionally an EMI file is parsed as well to retrieve the metadata.
A command line as well as a GUI version are available. Run python3 gui_ser2emd.py for the GUI, or python3 cmdline_ser2emd.py --help for command line usage.
tif2emd¶
GUI tools to convert TIF files to EMD files, for either a single TIF file or a series of TIF files.