ncempy.edstomo package¶
Submodules¶
ncempy.edstomo.CharacteristicEmission module¶
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ncempy.edstomo.CharacteristicEmission.
ElamPrint
(s)¶
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ncempy.edstomo.CharacteristicEmission.
GetElamFluorescenceLines
(ElementName, E=None, I=None)[source]¶
ncempy.edstomo.DoGenfire module¶
ncempy.edstomo.bruker module¶
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ncempy.edstomo.bruker.
ExtractRawSignalsFromBrukerSequence
(InputDirectory=None, OutputEMD=None)[source]¶ Read in a set of Bruker bcf files containing EDS acquisitions and write an EMD file with the data.
Parameters: - InputDirectory (str) – Name of directory containing the bcf files.
- OutputEMD (str) – Name of the output file (may include a path).
Returns: None.
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ncempy.edstomo.bruker.
GetTiltsFromBrukerSequence
(Directory=None)[source]¶ Find the set of Bruker bcf files and figure out their tilts based on filenames.
There should be a set of bcf files in a directory with names: … -10.bcf, -5.bcf, 0.bcf, 5.bcf … The number represents the stage tilt of that stack. The angles do not matter but the names must be coded as above. They will be automatically read and sorted.
Parameters: Directory (str) – Name of directory containing the bcf files. Returns: A list of tilt angles. Return type: (list of floats)